qubfast - Library to accelerate QUB Express

• source package (zip)
• qubfast.dll
• qubfast.lib
• qubfast.exp
• qubfast.h
• callbk_reportstream.h -- std::ostream wrapper for callbk_reportfun.h
• decode_acquirefile_samples.h -- un-compresses *.acquire's 16-bit data
• decode_acquirefile_samples.cpp
• gettimeofday.h -- fills a POSIX deficiency in Win32
• gettimeofday.cpp
• lm_eval.h -- sample function for Levenburg-Marquardt
• lm_eval.cpp
• lmmin.h -- Levenburg-Marquardt minimization
• lmmin.cpp
• lmmin_fit.h -- curve fitting using lmmin
• lmmin_fit.cpp
• matrixutil.h -- eigenvalues, svd, and matrix inversion
• matrixutil.cpp
• max_ll_util.h -- Q matrix, missed-events correction, equilibrium
• max_ll_util.cpp
• milutil.h -- legacy memory allocation and multiplication routines
• milutil.cpp
• nmsimplex.h -- Nelder-Mead simplex minimization
• nmsimplex.cpp
• qub_adaptive_resample.h -- "resample by delta"
• qub_adaptive_resample.cpp
• qub_constraints.h -- linear constraint system for parameters
• qub_constraints.cpp
• qub_dfilter.h -- FilterWiz-compatible filtering
• qub_dfilter.cpp
• qub_dfpmin.h -- Davidon-Fletcher-Powell minimization
• qub_dfpmin.cpp
• qub_doseresponse.h -- peak/equilibrium measurements for Hill panel
• qub_doseresponse.cpp
• qub_filter.h -- gaussian low-pass filter
• qub_filter.cpp
• qub_findloops.h -- cycle detection, using boost::graph
• qub_findloops.cpp
• QUB_Freezer.h -- caching mechanism for qubidl
• QUB_Heap.h -- e.g. priority queues
• qubidl.h -- random-access dwell sequences
• qubidl.cpp
• qub_idlstim.h -- stimulus idealization (non-model-based)
• qub_idlstim.cpp
• qub_kalman.h -- Kalman filter (signal tracking)
• qub_kalman.cpp
• qub_raster_samples.h -- pre-render sampled data to pixel y-values
• qub_raster_samples.cpp
• qub_simulate.h -- stochastic simulation of hidden markov model
• qub_simulate.cpp
• qubx_model.h -- model interchange and constraints for plugins -- C linkage
• qubx_model_storage.h -- C++ linkage and internal classes
• qubx_model.cpp
• running_mean.h -- single-pass approximation for mean and standard deviation
• running_mean.cpp
• sampled_gaussian.h -- precomputed gaussian distribution
• sampled_gaussian.cpp
• ublas_plus.h -- ublas::matrix headers and helpers
• ublas_matrixutil.h -- ublas::matrix svd, inversion, etc.
• ublas_matrixutil.cpp
• Makefile_qubfast.in