QUB — Markov simulation and analysis for single molecules and ensembles

Quick start: QUB Online Fitness X-Means Movie Maker

Source code

QUB Online

(includes Fitness and X-Means apps)

Browse the source code...
Download qub-online.zip

Clone the repository:

git clone https://qub.mandelics.com/qub-online.git

QUB Express

(includes Fitness for desktop)

Browse the source code...
API Documentation...
Download qub-express-source.zip
Windows: Installer (requires these MS libraries)
Mac: disk image

Clone the repository:

git clone https://qub.mandelics.com/qub-express.git

QuB Classic

Browse the source code...
Download qub-source.zip

File Formats

DWT — "dwell time" file containing idealized events
QDF — sampled data
QSF — "session file" containing analysis and settings for a QDF
QMF — model file
QMJ — model in JSON format
LDT — legacy sampled data format
MDL — legacy model format

Patches, bug reports, and questions

Please send patches and inquiries to .