qubx.data_types.SourceChunk

Class SourceChunk

object --+ | util_types.Anon --+ | SourceChunk

Known Subclasses:

SourceSeg

Describes one contiguous slice of data from the data source.

Instance Methods

__init__(self, file=None, signal=0, f=0, l=-1, included=True, latency=0, start=-1, sampling=None, baseline_nodes=True, group=0, **kw)
x.__init__(...) initializes x; see help(type(x)) for signature

source code

get_actual_bounds(self, first_offset=None, last_offset=None)

source code

get_samples(self, first_offset=None, last_offset=None)

source code

get_idealization(self, signal=None, mark_excluded=False, get_fragments=False, get_durations=False, get_amps=False, get_stds=False, first_offset=0, last_offset=None)
Returns the dwells in chunk as numpy arrays

source code

Inherited from util_types.Anon: __getattr__, __repr__, __str__, clone

Inherited from util_types.Anon (private): _find_arg_dicts, _str_indent

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __setattr__, __sizeof__, __subclasshook__

Instance Variables

[hide private]

baseline_nodes
True to subtract baseline nodes

f
first data point

file
qubx.data.QubData

filter_Hz
low-pass filter frequency, or None

group
Group column from List or Segments

idealized
True if segment has (starts with) idealized dwells

included
False if excluded

l
last data point

latency
number of samples to shift the data rightwards (ignored for idealization)

n
number of data points

sampling
sampling interval (sec)

signal
index of source signal

start
in ms

Properties

[hide private]

Inherited from object: __class__

init(self, file=None, signal=0, f=0, l=-1, included=True, latency=0, start=-1, sampling=None, baseline_nodes=True, group=0, **kw)
(Constructor)

source code

x.__init__(...) initializes x; see help(type(x)) for signature

Overrides: object.__init__: (inherited documentation)

get_idealization(self, signal=None, mark_excluded=False, get_fragments=False, get_durations=False, get_amps=False, get_stds=False, first_offset=0, last_offset=None)

source code

Returns the dwells in chunk as numpy arrays

Parameters:

signal - signal index, or None to use the chunk.signal
mark_excluded - if True, replaces excluded dwells with class -1 (or -2?)
get_fragments - if False, omits first/last dwells if incomplete
get_durations - if True, returns durations
get_amps - if True: returns amps
get_stds - if True: returns stds
first_offset - (optional) to narrow the desired time range
last_offset - (optional)

Returns:

firsts, lasts, classes[, durations, amps, stds]

Class SourceChunk

__init__(self, file=None, signal=0, f=0, l=-1, included=True, latency=0, start=-1, sampling=None, baseline_nodes=True, group=0, **kw) (Constructor)

get_idealization(self, signal=None, mark_excluded=False, get_fragments=False, get_durations=False, get_amps=False, get_stds=False, first_offset=0, last_offset=None)

init(self, file=None, signal=0, f=0, l=-1, included=True, latency=0, start=-1, sampling=None, baseline_nodes=True, group=0, **kw)
(Constructor)