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Data file structure and i/o.
This is the (qubx.tree) format of a simulation scratch file:
Sampling SignalCount Signals [] Signal Name Units Segments [] Segment SampleCount Signals [] Signal Samples [(float[SampleCount])] IdealSignals [] IdealSignal SignalIndex Segments [] Segment [f, l] {amp, sd, DwellCount, Classes, Firsts, Lasts}
Copyright 2008-2014 Research Foundation State University of New York This file is part of QUB Express.
QUB Express is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
QUB Express is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License, named LICENSE.txt, in the QUB Express program directory. If not, see <http://www.gnu.org/licenses/>.
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Segmentation Describes how a contiguous range of samples is divided into segments. |
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SigBaseline Represents piecewise-linear baseline of one signal. |
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SigIdl Represents one idealized signal; resizes with Segmentation; stores per-segment info. |
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SigOverlays | |||
Exclusion Represents excluded and included regions as an idealization with class 0 and 1 resp. |
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SelectionList | |||
SelectionLists | |||
IdlUpdater Manages updates to idealization to make them undoable and to emit the OnChangeIdealization event; make sure to call done(). |
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StimulusRecord Describes how to find and idealize the time course of a model variable. |
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QubData Base class for an open data file. |
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SourceChunk Describes one contiguous slice of data from the data source. |
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SourceSeg Describes one segment from the data source. |
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QubData_Analog Base class for one analog signal. |
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QubData_Analog_Computed | |||
QubData_QDF_Analog | |||
QubData_QDF One open QDF (or QSF) data file. |
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QubData_Bin_Analog | |||
QubData_Bin One open raw binary data file. |
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QubData_LDT_Analog | |||
QubData_LDT One open LDT file (classic QuB data) |
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QubData_Scratch_Analog Reads data from a qub express scratch file (simulation). |
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QubData_Blank | |||
QubData_Scratch One open qub express scratch file (simulation); .tree can be repeatedly re-assigned. |
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TextStats | |||
QubDatas A table-like collection of open files. |
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DOWNSAMPLE_ALL_LOGCOUNT = 2.0
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DOWNSAMPLE_LOGSLOPE = 3.0
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SAVEBUFLEN = 262144
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Readers =
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Writers =
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STIM_TYPES =
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STIM_LABELS =
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COPY_ROWS_ALL = 0
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COPY_ROWS_CHECKED = 3
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COPY_ROWS_CRITERIA = 2
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COPY_ROWS_GROUP = 1
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DATASOURCE_FILE = 0
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DATASOURCE_LIST = 2
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DATASOURCE_SCREEN = 1
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STIM_TYPE_CONST = 0
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STIM_TYPE_EXPR = 2
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STIM_TYPE_SIGNAL = 1
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__package__ =
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e = 2.71828182846
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pi = 3.14159265359
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rdbk =
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rdbreak =
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rdname =
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Yields (numpy.array(float32) of sampled data, sampling) for each chunk.
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Readers
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Writers
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